Publications

Magdalena Machnicka

Number of publications: 8

2021

• Marlena Osipowicz, Bartosz Wilczyński , Magdalena Machnicka , Careful feature selection is key in classification of Alzheimer’s disease patients based on whole-genome sequencing data, NAR Genomics and Bioinformatics, 3 (3) 2021, p. 1-8. See in PBN
• Karolina Stępniak, Magdalena Machnicka , Jakub Mieczkowski, Anna Macioszek, Bartosz Wojtaś, Bartłomiej Gielniewski, Katarzyna Poleszak, Małgorzata Perycz, sylwia Król, Rafał Guzik, Michał Dąbrowski, Michał Dramiński, Marta Jardanowska, Ilona Grabowicz, Agata Dziedzic, Hanna Kranas, Karolina Sienkiewicz, Klev Diamanti, Katarzyna Kotulska-Jóźwiak, Wiesława Grajkowska, Marcin Roszkowski, Tomasz Czernicki, Andrzej Marchel, Henryk Komorowski, Bożena Kamińska-Kaczmarek, Bartosz Wilczyński , Mapping chromatin accessibility and active regulatory elements reveals pathological mechanisms in human gliomas, Nature Communications, 12 (1) 2021, p. 1-17. See in PBN

2019

• Piotr Formanowicz, Joanna Krwawicz, Marcin Radom, Magdalena Machnicka , Janusz Bujnicki, Petri net–based model of the human DNA base excision repair pathway, PLoS ONE, vol. 14 (iss. 9) 2019, p. e0217913-1-e0217913-26. See in PBN

2018

• Pietro Boccaletto, Magdalena Machnicka , Elżbieta Purta, Paweł Piątkowski, Błażej Bagiński, Tomasz Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter, Mark Helm, Janusz Bujnicki, MODOMICS: a database of RNA modification pathways. 2017 update, Nucleic Acids Research, 46 (D1) 2018, p. D303–D307. See in PBN

2015

• Katarzyna H. Kaminska, Janusz Bujnicki, Magdalena Machnicka , Stanisław Dunin-Horkawicz, Phylogenomics and sequence-structure-function relationships in the GmrSD family of Type IV restriction enzymes, BMC Bioinformatics, 2015. See in PBN

2013

• Anna Łukasik, Marcin Skorupski, Kaja Milanowska, Katarzyna Mikołajczak, Kristian M. Rother, Martyna Nowacka, Zuzanna Balcer, Janusz Bujnicki, Magdalena Machnicka , RNApathwaysDB—a database of RNA maturation and decay pathways, Nucleic Acids Research, 2013. See in PBN

2012

• Kaja Milanowska, Okan Osman Oglou, Elzbieta Purta, Anna Olchowik, Witold Januszewski, Sebastian Kalinowski, Kristian M. Rother, Mark Helm, Janusz M. Bujnicki, Henri Grosjean, Małgorzata Kurkowska, Magdalena Machnicka , Stanisław Dunin-Horkawicz, MODOMICS: a database of RNA modification pathways—2013 update, Nucleic Acids Research, 41 (D1) 2012, p. D262-D267. See in PBN

Others

• Bartosz Wilczyński , Magdalena Machnicka , Machine learning and deep learning for the advancement of epigenomics, Epigenetics of the Immune System, , p. 217-237. See in PBN