Weekly research seminar
Organizers
- prof. dr hab. Anna Gambin
- dr Aleksander Jankowski
- dr hab. Bartosz Wilczyński
Information
Wednesdays, 10:15 a.m. , room: 5820Home page
http://bioputer.mimuw.edu.pl/seminars/bob/Research fields
List of talks
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Nov. 30, 2022, 10:15 a.m.
Marta Stępniewska-Dziubińska (NVIDIA)
Deep Learning for Drug Discovery at NVIDIA
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Nov. 23, 2022, 10:15 a.m.
Aleksandra Cabaj (Nencki Institute of Experimental Biology)
Modelling the impact of Hypoxia Inducible Factors binding on gene expression in human endothelial cells during hypoxia
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Nov. 16, 2022, 10:15 a.m.
Michał Burdukiewicz (Autonomous University of Barcelona)
The impact of negative data sampling on antimicrobial peptide prediction
Peptydy to krótkie łańcuchy aminokwasowe, które pełnią wiele ważnych biologicznych funkcji (np. przeciwdrobnoustrojowe). Z tych względów badacze poszukują nowych peptydów o potencjalnie istotnych funkcjach, co jednak jest bardzo czaso- i kosztochłonne w warunkach laboratoryjnych. Dlatego …
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Oct. 26, 2022, 10:15 a.m.
Martin Vingron (Max Planck Institute for Molecular Genetics)
"Association Plots" and joint clustering and embedding of genes and cells
Single-cell transcriptome analysis poses many problems in visualizing and analyzing data. Based on the geometric interpretation of correspondence analysis biplots we define "Association Plots" to depict genes that characterize ("are associated with") a cluster of …
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Oct. 19, 2022, 10:15 a.m.
Jakub Karasiński; Piotr Radziński (CNBCh UW; MIM UW)
Ideas on the isotope ratio measurements by MC-ICP-MS: Elimination of isotope standard
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Oct. 12, 2022, 10:15 a.m.
Grzegorz Skoraczyński (MIM UW)
Alignstein: optimal transport and retention time alignment
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June 1, 2022, 10:15 a.m.
Patrycja Rosa (MIM UW and Nencki Institute of Experimental Biology)
Exploring gene expression features concordant with Topologically Associating Domains
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May 25, 2022, 10:15 a.m.
Stanisław Dunin-Horkawicz (CeNT UW)
Exploring proteins and their interactions with the aid of computational tools
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May 18, 2022, 10:15 a.m.
Oliver Eulenstein (Iowa State University)
Problems in Phylogenetic Diversity
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May 11, 2022, 10:15 a.m.
Grzegorz Preibisch (MIM UW and Covid Genomics)
Machine Learning in Evolution prediction
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April 27, 2022, 10:15 a.m.
Paulina Szymczak (MIM UW)
Explainable variational autoencoder for multiomics scRNA-seq data
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April 20, 2022, 10:15 a.m.
Jarosław Paszek (MIM UW)
Taming the Duplication-Loss-Coalescence Model with Integer Linear Programming