Seminar Computational Biology and Bioinformatics

Organizers

• prof. dr hab. Anna Gambin
• dr Aleksander Jankowski
• dr hab. Bartosz Wilczyński, prof. ucz.

Information

Home page

Research fields

• Computational Biology and Bioinformatics

List of talks

• Nov. 20, 2024, 10:15 a.m.
  Tomasz W. Turowski (Institute of Biochemistry and Biophysics PAS)
  Model of immobilized RNA polymerase (Model of immobilized RNA polymerase)
  

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• Nov. 13, 2024, 10:15 a.m.
  Justyna Król (MIM UW)
  Sliced-Wasserstein Flows: Nonparametric Generative Modeling via Optimal Transport and Diffusions (Sliced-Wasserstein Flows: Nonparametric Generative Modeling via Optimal Transport and Diffusions)
  

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• Nov. 6, 2024, 10:15 a.m.
  Adam Cicherski (MIM UW)
  Alignment Free Algorithm for Pangenome Graph Construction (Alignment Free Algorithm for Pangenome Graph Construction)
  

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• Oct. 23, 2024, 10:15 a.m.
  Ada Hryniewicka (MIM UW and Molecure)
  Autoencoders for representing RNA fragments (Autoencoders for representing RNA fragments)
  

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• Oct. 16, 2024, 10:15 a.m.
  Łukasz P. Kozłowski (MIM UW)
  High Performance Computing offer for Polish scientists (High Performance Computing offer for Polish scientists)
  

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• Oct. 9, 2024, 10:15 a.m.
  Marcin Wierzbiński (MIM UW)
  Language modelling for DNA sequences (Language modelling for DNA sequences)
  

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• June 12, 2024, 10:15 a.m.
  Anna Lisiecka (MIM UW)
  Transformation of variation graphs into whole genome alignment graphs
  

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• June 5, 2024, 10:15 a.m.
  Piotr Radziński (MIM UW)
  Uncertainty propagation of MC-ICP-MS measurement methods
  

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• May 29, 2024, 10:15 a.m.
  Konrad Łukaszyk (CeNT UW)
  Promoter structure-based gene classification
  

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• May 22, 2024, 10:15 a.m.
  Gregory Kucherov (CNRS & Gustave Eiffel University)
  Invertible Bloom lookup tables and their (possible) applications to genomics
  

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• May 15, 2024, 10:15 a.m.
  Barbara Domżał (MIM UW)
  NMR spectroscopy: challenges and solutions using optimal transport theory
  

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• May 8, 2024, 10:15 a.m.
  Marcin Możejko (MIM UW)
  Discovering Spatial Tissue Landscapes using Cellohood Model
  

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• April 24, 2024, 10:15 a.m.
  Jarosław Paszek (MIM UW)
  Unifying duplication episode clustering and gene-species mapping inference
  

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• April 17, 2024, 10:15 a.m.
  Przemysław Decewicz (Faculty of Biology, UW)
  Towards efficient data-driven biomonitoring and bioprospecting (Towards efficient data-driven biomonitoring and bioprospecting)
  

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• April 10, 2024, 10:15 a.m.
  Barbara Poszewiecka (MIMUW)
  Recovering complex chromosomal rearrangements from karyotype graphs (Zastosowanie grafów kariotypowych w modelowaniu złożonych rearanżacji chromosomowych)
  

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