Weekly research seminar
Organizers
- prof. dr hab. Anna Gambin
- dr Aleksander Jankowski
- dr hab. Bartosz Wilczyński
Information
Wednesdays, 10:15 a.m. , room: 5820Home page
http://bioputer.mimuw.edu.pl/seminars/bob/Research fields
List of talks
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April 26, 2023, 10:15 a.m.
Kazimierz Oksza-Orzechowski (MIM UW)
CaClust: mapping cells to the clonal structure in Follicular Lymphoma
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April 19, 2023, 10:15 a.m.
Senbai Kang (MIM UW)
DelSIEVE: joint inference of single-nucleotide variants, deletions, and cell phylogeny from single-cell DNA sequencing data
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April 12, 2023, 10:15 a.m.
Jan Poleszczuk (Institute of Biocybernetics and Biomedical Engineering PAS and Maria Sklodowska-Curie National Research Institute of Oncology)
AI/ML in Polish healthcare system: current opportunities and challenges
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April 5, 2023, 10:15 a.m.
Karol Wróblewski (CNBCh UW)
CABS-flex as a de novo structure prediction tool for cyclic peptides
Cyclic peptides have become an attractive class of molecules in drug design due to their diverse biological activities and increased stability. However, their design and synthesis can be challenging due to their complex three-dimensional structures. …
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March 29, 2023, 10:15 a.m.
Teresa Przytycka (National Library of Medicine/National Institutes of Health)
Delineating interactions between mutational signatures, cellular processes, and environment through computational approaches
Cancer genomes accumulate many somatic mutations resulting from carcinogenic exposures, cancer-related aberrations of DNA maintenance machinery, and normal stochastic events. These processes often lead to distinctive patterns of mutations, called mutational signatures. However interpreting mutation …
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March 22, 2023, 10:15 a.m.
Andrzej Mizera (MIM UW)
Divide & Control: An Efficient Decomposition-based Approach Towards the Control of Asynchronous Boolean Networks
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March 15, 2023, 10:15 a.m.
Magda Markowska (MIM UW)
CONSET: joint copy number and single nucleotide variant event tree model of evolutionary tumor history for single-cell data
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March 8, 2023, 10:15 a.m.
Stanisław Jastrzębski (Molecule.one)
On the Implications of the Simplicity Bias in Deep Nets for the “AI Scientist”: The Good, The Bad, and The Ugly
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March 1, 2023, 10:15 a.m.
Magdalena Machnicka (MIM UW)
Analysis of trans-homolog chromatin interactions based on Hi-C data
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Jan. 25, 2023, 10:15 a.m.
Michał Ciach (MIM UW)
The interkingdom gene transfer in 44 basal fungi and the open problems in large scale phylogenetic studies of horizontal gene transfer
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Jan. 18, 2023, 10:15 a.m.
Agnieszka Geras (MiNI PW; MIM UW)
A novel probabilistic model for cell type identification in spatial transcriptomics and single-cell RNA sequencing data
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Jan. 11, 2023, 10:15 a.m.
Barbara Poszewiecka (MIM UW)
From 48 to 46 chromosomes: a novel targeted assembler of segmental duplications unravels the complexity of the HSA2 fusion
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