Seminar Computational Biology and Bioinformatics

Organizers

• prof. dr hab. Anna Gambin
• dr Aleksander Jankowski
• dr hab. Bartosz Wilczyński, prof. ucz.

Information

Home page

Research fields

• Computational Biology and Bioinformatics

List of talks

• Dec. 18, 2024, 10:15 a.m.
  Małgorzata Łazęcka (MIM UW)
  Factor Analysis with Correlated Topic Model for Multimodal Data Integration (Factor Analysis with Correlated Topic Model for Multimodal Data Integration)
  

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• Dec. 4, 2024, 10:15 a.m.
  Jakub Zarzycki (IDEAS NCBR and MIM UW)
  pbn-STAC: Deep Reinforcement Learning-based Framework for Cellular Reprogramming (pbn-STAC: Deep Reinforcement Learning-based Framework for Cellular Reprogramming)
  

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• Nov. 27, 2024, 10:15 a.m.
  Irina Tuszyńska (Molecure)
  Computational methods supporting the drug design process at Molecure (Computational methods supporting the drug design process at Molecure)
  

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• Nov. 20, 2024, 10:15 a.m.
  Tomasz W. Turowski (Institute of Biochemistry and Biophysics PAS)
  Model of immobilized RNA polymerase (Model of immobilized RNA polymerase)
  

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• Nov. 13, 2024, 10:15 a.m.
  Justyna Król (MIM UW)
  Sliced-Wasserstein Flows: Nonparametric Generative Modeling via Optimal Transport and Diffusions (Sliced-Wasserstein Flows: Nonparametric Generative Modeling via Optimal Transport and Diffusions)
  

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• Nov. 6, 2024, 10:15 a.m.
  Adam Cicherski (MIM UW)
  Alignment Free Algorithm for Pangenome Graph Construction (Alignment Free Algorithm for Pangenome Graph Construction)
  

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• Oct. 23, 2024, 10:15 a.m.
  Ada Hryniewicka (MIM UW and Molecure)
  Autoencoders for representing RNA fragments (Autoencoders for representing RNA fragments)
  

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• Oct. 16, 2024, 10:15 a.m.
  Łukasz P. Kozłowski (MIM UW)
  High Performance Computing offer for Polish scientists (High Performance Computing offer for Polish scientists)
  

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• Oct. 9, 2024, 10:15 a.m.
  Marcin Wierzbiński (MIM UW)
  Language modelling for DNA sequences (Language modelling for DNA sequences)
  

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• June 12, 2024, 10:15 a.m.
  Anna Lisiecka (MIM UW)
  Transformation of variation graphs into whole genome alignment graphs
  

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• June 5, 2024, 10:15 a.m.
  Piotr Radziński (MIM UW)
  Uncertainty propagation of MC-ICP-MS measurement methods
  

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• May 29, 2024, 10:15 a.m.
  Konrad Łukaszyk (CeNT UW)
  Promoter structure-based gene classification
  

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• May 22, 2024, 10:15 a.m.
  Gregory Kucherov (CNRS & Gustave Eiffel University)
  Invertible Bloom lookup tables and their (possible) applications to genomics
  

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• May 15, 2024, 10:15 a.m.
  Barbara Domżał (MIM UW)
  NMR spectroscopy: challenges and solutions using optimal transport theory
  

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• May 8, 2024, 10:15 a.m.
  Marcin Możejko (MIM UW)
  Discovering Spatial Tissue Landscapes using Cellohood Model
  

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