Publications

Łukasz Kozłowski

Number of publications: 22

2024

• Monika Szadkowska, Aleksandra Maria, Daria Sowik, Dariusz Wyrzykowski, Elzbieta Jankowska, Joanna Makowska, Magdalena Plotka, Łukasz Kozłowski , Molecular characterization of the PhiKo endolysin from Thermus thermophilus HB27 bacteriophage phiKo and its cryptic lytic peptide RAP-29, Frontiers in Microbiology, 14 2024, p. 1303794. See in PBN

2021

• Arnthór Aevarsson, Anna-Karina Kaczorowska, Björn Thor Adalsteinsson, Josefin Ahlqvist, Salam Al-Karadaghi, Joseph Altenbuchner, Hasan Arsin, Úlfur Áugúst Átlasson, David Brandt, Magdalena Cichowicz-Cieślak, Katy A S Cornish, Jérémy Courtin, Slawomir Dabrowski, Håkon Dahle, Samia Djeffane, Sebastian Dorawa, Julia Dusaucy, Francois Enault, Anita-Elin Fedøy, Stefanie Freitag-Pohl, Olafur H Fridjonsson, Clovis Galiez, Eirin Glomsaker, Mickael Guérin, Sigurd E Gundesø, Elisabet E Gudmundsdóttir, Hördur Gudmundsson, Maria Håkansson, Christian Henke, Alexandra Helleux, Jørn Remi Henriksen, Sigrídur Hjörleifdóttir, Gudmundur O Hreggvidsson, Andrius Jasilionis, Annika Jochheim, Ilmur Jónsdóttir, Lilja Björk Jónsdóttir, Agata Jurczak-Kurek, Tadeusz Kaczorowski, Jörn Kalinowski, Łukasz Kozłowski , Mart Krupovic, Karolina Kwiatkowska-Semrau, Olav Lanes, Joanna Lange, Julien Lebrat, Javier Linares-Pastén, Ying Liu, Steffen A Lorentsen, Tobias Lutterman, Thibaud Mas, William Merré, Milot Mirdita, Agnieszka Morzywołek, Eric Olo Ndela, Eva Nordberg Karlsson, Edda Olgudóttir, Cathrine Pedersen, Francine Perler, Sólveig K Pétursdóttir, Magdalena Plotka, Ehmke Pohl, David Prangishvili, Jessica L Ray, Birkir Reynisson, Tara Róbertsdóttir, Ruth-Anne Sandaa, Alexander Sczyrba, Sigurlaug Skírnisdóttir, Johannes Söding, Terese Solstad, Ida H Steen, Sigmar Karl Stefánsson, Martin Steinegger, Katrine Stange Overå, Bernd Striberny, Anders Svensson, Monika Szadkowska, Emma J Tarrant, Paul Terzian, Mathilde Tourigny, Tom van den Bergh, Justine Vanhalst, Jonathan Vincent, Bas Vroling, Björn Walse, Lei Wang, Hildegard Watzlawick, Martin Welin, Olesia Werbowy, Ewa Wons, Ruoshi Zhang, Going to extremes - a metagenomic journey into the dark matter of life, FEMS Microbiology Letters, 368 (12) 2021, p. 1-16. See in PBN
• Łukasz Kozłowski , IPC 2.0: prediction of isoelectric point and pKa dissociation constants, Nucleic Acids Research, 49 (W1) 2021, p. W285–W292. See in PBN
• Agnieszka Morzywolek, Magdalena Plotka, Anna-Karina Kaczorowska, Monika Szadkowska, Łukasz Kozłowski , Dariusz Wyrzykowski, Joanna Makowska, Jerel J. Waters, Steven M. Swift, David M. Donovan, Tadeusz Kaczorowski, Novel lytic enzyme of prophage origin from Clostridium botulinum E3 strain Alaska E43 with bactericidal activity against Clostridial cells, International Journal of Molecular Sciences, 22 (17) 2021, p. 1-21. See in PBN
• Łukasz Kozłowski , Proteome-pI 2.0: proteome isoelectric point database update, Nucleic Acids Research, 2021, p. 1-6. See in PBN

2020

• Ariel Erijman, Salma Sohrabi-Jahromi, James Fishburn, Linda Warfield, Jacob Schreiber, William S. Noble, Johannes Söding, Steven Hahn, Łukasz Kozłowski , A High-Throughput Screen for Transcription Activation Domains Reveals Their Sequence Features and Permits Prediction by Deep Learning, Molecular cell, 78 (5) 2020, p. 890-902.e6. See in PBN

2019

• Łukasz Kozłowski , Magdalena Plotka, Enea Sancho-Vaello, Sebastian Dorawa, Anna Kaczorowska, Tadeusz Kaczorowski, Kornelius Zeth, Structure and function of the Ts2631 endolysin of Thermus scotoductus phage vB_Tsc2631 with unique N-terminal extension used for peptidoglycan binding, Scientific Reports, 9 2019, p. 1-14. See in PBN

2017

• Łukasz Kozłowski , Proteome-pI: proteome isoelectric point database, Nucleic Acids Research, 2017. See in PBN

2016

• Łukasz Kozłowski , IPC – Isoelectric Point Calculator, Biology Direct, 2016. See in PBN

2015

• Łukasz Kozłowski , Gudmundur O. Hreggvidsson, Jakob K. Kristjansson, Slawomir Dabrowski, Janusz Bujnicki, Audur Thorisdottir, Sigurlaug Skírnisdottir, Sigridur Hjörleifsdottir, Olafur H. Fridjonsson, Joanna Makowska, Magdalena Plotka, Agnieszka Morzywolek, Anna Kaczorowska, Tadeusz Kaczorowski, Biochemical Characterization and Validation of a Catalytic Site of a Highly Thermostable Ts2631 Endolysin from the Thermus scotoductus Phage vB_Tsc2631, PLoS ONE, 2015. See in PBN
• Janusz Bujnicki, Łukasz Kozłowski , Michal J. Pietal, GDFuzz3D: a method for protein 3D structure reconstruction from contact maps, based on a non-Euclidean distance function, Bioinformatics, 2015. See in PBN
• Andrzej Kloczkowski, Łukasz Kozłowski , Marcin Pawłowski, MQAPsingle: A quasi single‐model approach for estimation of the quality of individual protein structure models, Proteins: Structure, Function and Genetics, 2015. See in PBN
• Justyna Czarnecka, Grzegorz Chojnowski, Łukasz Kozłowski , Janusz Bujnicki, Dawid Głów, Dariusz Pianka, Agata SULEJ, Krzysztof Skowronek, Sequence-specific cleavage of dsRNA by Mini-III RNase, Nucleic Acids Research, 2015. See in PBN

2014

• Joanna M. Kasprzak, Grzegorz Chojnowski, Dorota Matelska, Irina Tuszynska, Janusz Bujnicki, Łukasz Kozłowski , Stanisław Dunin-Horkawicz, Marcin Magnus, Computational modeling of protein-RNA complex structures, Methods, 2014. See in PBN
• Janusz Bujnicki, Artur Jarmołowski, Łukasz Kozłowski , Izabela Sierocka, Zofia Szweykowska-Kulińska, Female-specific gene expression in dioecious liverwort Pellia endiviifolia is developmentally regulated and connected to archegonia production, BMC Plant Biology, 2014. See in PBN
• G. O. Hreggvidsson, O. H. Fridjonsson, A. Morzywolek, A. Stefanska, M. Plotka, Łukasz Kozłowski , J. M. Bujnicki, S. Dabrowski, J. K. Kristjansson, Anna Kaczorowska, Tadeusz Kaczorowski, Stanisław Dunin-Horkawicz, Novel highly thermostable endolysin from Thermus scotoductus MAT2119 bacteriophage Ph2119 with amino acid sequence similarity to eukaryotic peptidoglycan recognition proteins, Applied and Environmental Microbiology, 2014. See in PBN

2013

• Janusz Bujnicki, Łukasz Kozłowski , Tomasz Puton, Kristian M. Rother, CompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure prediction, Nucleic Acids Research, 2013. See in PBN

2012

• D. Abdel-Hadi, N. Ahmad, M. Al-Haggar, Janusz Bujnicki, S. Hamed, Łukasz Kozłowski , A. Madej-Pilarczyk, Monika Puzianowska-Kuźnicka, A. Shams, S. Yahia, A novel homozygous p.Arg527Leu LMNA mutation in two unrelated Egyptian families causes overlapping mandibuloacral dysplasia and progeria syndrome, European Journal of Human Genetics, 2012. See in PBN
• Janusz M. Bujnicki, Łukasz Kozłowski , Tomasz Puton, Kristian Rother, Irina Tuszynska, Computational methods for prediction of protein–RNA interactions, Journal of Structural Biology, 2012. See in PBN
• J. M. Bujnicki, Y. Fukumaki, S. Kawamura, J. R. Kidd, K. K. Kidd, Łukasz Kozłowski , S. Mano, S. Nakagome, H. Oota, H. Shibata, Crohn's disease risk alleles on the NOD2 locus have been maintained by natural selection on standing variation, Molecular Biology and Evolution, 2012. See in PBN
• Janusz Bujnicki, Łukasz Kozłowski , MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins, BMC Bioinformatics, 2012. See in PBN

2008

• Janusz Bujnicki, Marcin Jąkalski, Łukasz Kozłowski , Karolina Majorek, First Steps of Protein Structure Prediction, 2008. See in PBN