Publications

Krzysztof Gogolewski

Number of publications: 14

2023

• Barbara Poszewiecka, Krzysztof Gogolewski , Justyna A. Karolak, Paweł Stankiewicz, Anna Gambin , PhaseDancer: a novel targeted assembler of segmental duplications unravels the complexity of the human chromosome 2 fusion going from 48 to 46 chromosomes in hominin evolution, GENOME BIOLOGY, 24 (1) 2023. See in PBN

2022

• Krzysztof Gogolewski , Błażej Miasojedow , Małgorzata Sadkowska-Todys, Małgorzata Stępień, Urszula Demkow, Agnieszka Lech, Ewa Szczurek , Daniel Rabczenko, Magdalena Rosińska, Anna Gambin , Data-driven case fatality rate estimation for the primary lineage of SARS-CoV-2 in Poland, Methods, 203 2022, p. 584-593. See in PBN
• Johannes Bracher, Daniel Wolffram, Jannik Deuschel, Konstantin Görgen, Jakob L. Ketterer, Alexander Ullrich, Sam Abbott, Maria V. Barbarossa, Dimitris Bertsimas, Sangeeta Bhatia, Marcin Bodych, Nikos I. Bosse, Jan Pablo Burgard, Lauren Castro, Geoffrey Fairchild, Jochen Fiedler, Jan Fuhrmann, Sebastian Funk, Anna Gambin , Krzysztof Gogolewski , Stefan Heyder, Thomas Hotz, Yuri Kheifetz, Holger Kirsten, Tyll Krueger, Ekaterina Krymova, Neele Leithäuser, Michael L. Li, Jan H. Meinke, Błażej Miasojedow , Isaac J. Michaud, Jan Mohring, Pierre Nouvellet, Jedrzej M. Nowosielski, Tomasz Ozanski, Maciej Radwan, Franciszek Rakowski, Markus Scholz, Saksham Soni, Ajitesh Srivastava, Tilmann Gneiting, Melanie Schienle, National and subnational short-term forecasting of COVID-19 in Germany and Poland during early 2021, Communications Medicine, 2 2022, p. 136:1-17. See in PBN
• Barbara Poszewiecka, Krzysztof Gogolewski , Paweł Stankiewicz, Anna Gambin , Revised time estimation of the ancestral human chromosome 2 fusion, BMC Genomics, 23 (S6) 2022, p. 1-15. See in PBN
• Barbara Poszewiecka, Victor Murcia Pienkowski, Karol Nowosad, Jérôme D Robin, Krzysztof Gogolewski , Anna Gambin , TADeus2: a web server facilitating the clinical diagnosis by pathogenicity assessment of structural variations disarranging 3D chromatin structure, Nucleic Acids Research, 50 (W1) 2022, p. W744-W752. See in PBN

2021

• Johannes Bracher, Daniel Wolffram, Jannik Deuschel, Konstantin Görgen, Jakob Ketterer, Alexander Ullrich, Sam Abbott, Maria Vittoria Barbarossa, Dimitris Bertsimas, Sangeeta Bhatia, MARCIN BODYCH, Nikos I. Bosse, Jan Pablo Burgard, Lauren Castro, Geoffrey Fairchild, Jan Fuhrmann, Sebastian Funk, Krzysztof Gogolewski , Quanquan Gu, Stefan Heyder, Thomas Hotz, Yuri Kheifetz, Holger Kirsten, Ekaterina Krymova, Michael Lingzhi Li, Jan H. Meinke, Isaac J. Michaud, Karol Niedzielewski, Tomasz Ożański, Franciszek Rakowski, Markus Scholz, Saksham Soni, Ajitesh Srivastava, Jakub Zieliński, Difan Zou, Tilmann Gneiting, Melanie Schienle, Hamza Tazi Bouardi, Omar Skali Lami, Łukasz Górski , Magdalena Gruziel-Słomka, Artur Kaczorek, Antoni Moszyński, Jedrzej Nowosielski, Maciej Radwan, Marcin Semeniuk, Rafał Bartczuk, Jan Kisielewski, Przemysław Biecek , VIKTOR BEZBORODOV, Dave A. Osthus, Anna Gambin , Błażej Miasojedow , Ewa Szczurek , Daniel Rabczenko, Magdalena Rosińska, Barbara Pabjan, EWARYST RAFAJŁOWICZ, EWA SKUBALSKA-RAFAJŁOWICZ, WOJCIECH RAFAJŁOWICZ, Agata Migalska, Antoine Flahault, Elisa Manetti, Christine Choirat, Benjamín Béjar Haro, Gavin Lee, Guillaume Obozinski, Tao Sun, Dorina Thanou, Pan Xu, Jinghui Chen, Lingxiao Wang, Weitong Zhang, Viktor K. Prasanna, Frost Tianjian Xu, MAREK BAWIEC, TYLL KRÜGER, A pre-registered short-term forecasting study of COVID-19 in Germany and Poland during the second wave, Nature Communications, vol. 12 (art. 5173) 2021, p. 1-16. See in PBN
• Ewa Olchowik-Grabarek, Michał Aleksander Ciach, Krzysztof Gogolewski , Natalia Dobros, Paulina Ciechowicz, Hélène Freichels, Anna Gambin , Katerina Makarova, Katarzyna Zawada, Joanna Sajkowska-Kozielewicz, Harvest time affects antioxidant capacity, total polyphenol and flavonoid content of Polish St John’s wort’s (Hypericum perforatum L.) flowers, Scientific Reports, 11 (1) 2021, p. 1-12. See in PBN

2020

• Marcin Kostecki, Krzysztof Gogolewski , Anna Gambin , Low Entropy Sub-Networks Prevent the Integration of Metabolomic and Transcriptomic Data, Entropy, 22 (11) 2020, p. 1238. See in PBN

2019

• Krzysztof Gogolewski , Maciej Sykulski, Anna Gambin , Neo Christopher Chung , Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA Sequencing Data, Journal of Computational Biology, 26 (8) 2019, p. 782-793. See in PBN

2018

• Krzysztof Gogolewski , Marcin Kostecki, Anna Gambin , Renal cell carcinoma classification: a case study of pitfalls associated with metabolic landscape analysis, IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Madryt, Spain, 2 December 2018 - 5 December 2018. See in PBN

2017

• Krzysztof Gogolewski , Weronika Wronowska, Agnieszka Lech, Bogdan Lesyng, Anna Gambin , Inferring Molecular Processes Heterogeneity from Transcriptional Data, BioMed Research International, 2017 2017, p. 6961786:1-14. See in PBN

2014

• Anna Gambin , J. Andrieux, K. Becker, F. Boidein, W. Cao, S. Cheung, B. Delobel, A. V. Dharmadhikari, B. Duban-Bedu, P. Fang, Tomasz Gambin, J. K. George-Abraham, Krzysztof Gogolewski , S. Golla, E. Holinski-Feder, W. Jin, F. J. Probst, P. Stankiewicz, P. Szafranski, Molecular and clinical analyses of 16q24.1 duplications involving FOXF1 identify an evolutionarily unstable large minisatellite, BMC Medical Genetics, 15 (1) 2014, p. 128. See in PBN

Others

• Anna Gambin , Krzysztof Gogolewski , PCA-like Methods for the Integration of Single Cell RNA-seq Data with Metabolic Networks, 2018 IEEE 8th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), , p. 1-1. See in PBN
• Neo Christopher Chung, Anna Gambin , Krzysztof Gogolewski , Maciej Sykulski, Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA-seq Data. See in PBN