Publications

Journal: Journal of Computational Biology

Number of publications: 12

2024

• Sanket Wagle, Alexey Markin, Paweł Górecki , Tavis K. Anderson, Oliver Eulenstein, Asymmetric Cluster-Based Measures for Comparative Phylogenetics, Journal of Computational Biology, 31 (4) 2024, p. 312-327. See in PBN

2021

• Jarosław Paszek , Alexey Markin, Oliver Eulenstein, Paweł Górecki , Taming the Duplication-Loss-Coalescence Model with Integer Linear Programming, Journal of Computational Biology, 28 (8) 2021, p. 758-773. See in PBN

2020

• Édouard Bonnet, Paweł Rzążewski , Florian Sikora, Designing RNA Secondary Structures Is Hard, Journal of Computational Biology, 27 (3) 2020, p. 302-316. See in PBN

2019

• Bartosz Wilczyński , Rafał Zaborowski, BPscore: An Effective Metric for Meaningful Comparisons of Structural Chromosome Segmentations, Journal of Computational Biology, 26 (4) 2019, p. 305-314. See in PBN
• Krzysztof Gogolewski , Maciej Sykulski, Anna Gambin , Neo Christopher Chung , Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA Sequencing Data, Journal of Computational Biology, 26 (8) 2019, p. 782-793. See in PBN

2018

• M. A. Ciach, Mateusz Łącki, Błażej Miasojedow , F. Lermyte, D. Valkenborg, F. Sobott, Anna Gambin , Estimation of Rates of Reactions Triggered by Electron Transfer in Top-Down Mass Spectrometry, Journal of Computational Biology, 25 (3) 2018, p. 282-301. See in PBN

2016

• Jerzy Tiuryn , Bartosz Wilczyński , FastBill: An Improved Tool for Prediction of Cis-Regulatory Modules, Journal of Computational Biology, 2016. See in PBN

2014

• Oliver Eulenstein, Paweł Górecki , DrML: Probabilistic Modeling of Gene Duplications, Journal of Computational Biology, 2014. See in PBN

2011

• Przemysław Biecek , Norbert Dojer , Jerzy Tiuryn , Bi-Billboard: Symmetrization and Careful Choice of Informant Species Results in Higher Accuracy of Regulatory Element Prediction, Journal of Computational Biology, 2011. See in PBN

2010

• Przemysław Biecek , Ewa Szczurek , Jerzy Tiuryn , Martin Vingron, Introducing Knowledge into Differential Expression Analysis, Journal of Computational Biology, 2010. See in PBN

2009

• Anna Gambin , Bogusław Kluge, Wojciech Niemiro , Modeling Exopeptidase Activity from LC-MS Data, Journal of Computational Biology, 2009. See in PBN

2006

• Anna Gambin , Jerzy Tiuryn , Jerzy Tyszkiewicz , Alignment with context dependent scoring function, Journal of Computational Biology, 2006. See in PBN