Seminar Computational Biology and Bioinformatics

Organizers

• prof. dr hab. Anna Gambin
• dr Aleksander Jankowski
• dr hab. Bartosz Wilczyński, prof. ucz.

Information

Home page

Research fields

• Computational Biology and Bioinformatics

List of talks

• Jan. 12, 2022, 10:15 a.m.
  Krzysztof Koras (MIM UW)
  Variational autoencoders with latent space clustering
  

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• Dec. 22, 2021, 10:15 a.m.
  Marcin Możejko (MIM UW)
  HydrAMP: a deep generative model for antimicrobial peptide discovery
  

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• Dec. 15, 2021, 10:15 a.m.
  Sylwester Swat (Institute of Computing Science, Poznań University of Technology)
  ALGA – a new algorithm for genome assembly
  

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• Dec. 8, 2021, 10:15 a.m.
  Magda Markowska (MIM UW)
  CONET: Copy number event tree model of evolutionary tumor history for single-cell data
  

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• Dec. 1, 2021, 10:15 a.m.
  Matthias Heinig (Helmholtz Zentrum München)
  Gene regulatory networks from single cells to resolve complex trait genetics
  

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• Nov. 24, 2021, 10:15 a.m.
  Paweł Górecki (MIM UW)
  Inference of Phylogenetic Networks: New Algorithmic Results
  

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• Nov. 17, 2021, 10:15 a.m.
  Senbai Kang (MIM UW)
  SIEVE: Joint Inference of Tumor Phylogeny and Variant Calling from Single-cell DNA Sequencing Data
  

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• Nov. 10, 2021, 10:15 a.m.
  Neo Christopher Chung (MIM UW)
  Evaluation of Saliency Maps for Deep Neural Networks
  

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• Nov. 3, 2021, 10:15 a.m.
  Barbara Poszewiecka (MIM UW)
  A pipeline for resolving complex constitutional rearrangements using long-reads sequencing technology
  

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• Oct. 27, 2021, 10:15 a.m.
  Anna Macioszek (MIM UW)
  HMM-based method for identifying enrichment in signal from sequencing-based experiments
  

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• Oct. 20, 2021, 10:15 a.m.
  Łukasz P. Kozłowski (MIM UW)
  IPC 2.0 and Proteome-pI 2.0 (Predicting isoelectric point and pKa dissociation constants)
  

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• Oct. 13, 2021, 10:15 a.m.
  Grzegorz Bokota (MIM UW)
  Trapalyzer: A PartSeg plugin for the semi-automatic quantification of Neutrophil Extracellular Traps in fluorescence microscopic images
  

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• Oct. 6, 2021, 10:15 a.m.
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  Organizational meeting
  

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• March 11, 2020, 10:15 a.m.
  Sumanta Ray (CWI)
  CODC: A copula based model to identify differential coexpression
  

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• March 4, 2020, 10:15 a.m.
  Aleksander Jankowski
  Insights from chromosome conformation capture data
  

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